Structures/Decoys scores
SOAP RankScore module, calculating scores on decoys.
In SOAP, recovery function scores are treated as a separate scoring term, which enables a substaintial~1000000x increase in evaluation speed.
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class rankScores.dsscore(scorename='', dir='', dslist=[])[source]
Base class for decoy sets scores
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class rankScores.sfdsscore(dslist=[], bm='ss1', sfm='', features='', sftype='', par='', parvalue=[], type='', **argvs)[source]
Decoy sets scores calculated using recovery function
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class rankScores.spdsscore(dslist=[], bm='', ssp=<statsTable.scaledsp object>, model=[])[source]
Decoy sets scores calculated using stats tables
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calc_score(runnumber, reportstatus=True)[source]
Methods to benchmark the statistical potential, run on current directory
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calc_score_fromlist(dnlist)[source]
Methods to benchmark the statistical potential, run on current directory